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deploy_gitlab_ci: integrate only correct projects into the manifest

Tim Jaacks requested to merge fix-manifest-commit into master

Previously we integrated all projects into the manifest, even those that belonged to a different manifest branch. That led to all manifests having the same project revisions, even if they should be different due to different intgrated project branches.

Save a list of integration sources for each manifest branch separately now, so that we can check which project belongs to which manifest branch later.

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