Fix temporary dir path
We were passing the complete TemporaryDirectory object to the repo clone function instead of just the path string, resulting in the repo being cloned into a local dir "<TemporaryDirectory '/tmp/tmphwakypf8'>". Fix this to actually use the generated temp dir. This change makes it necessary to keep the TemporaryDirectory object reference until we don't need the directory anymore, otherwise it will be removed immediately.
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